UCSC Genome Browser Home UCSC Genome Browser Genome Browser - Interactively visualize genomic data BLAT - Rapidly align sequences to the genome In-Silico PCR - Rapidly align PCR primer pairs to the genome Table Browser - Download and filter data from the Genome Browser LiftOver - Convert genome coordinates between assemblies REST API - Returns data requested in JSON format Variant Annotation Integrator - Annotate
UCSC Genome Browser Home - BLAT UCSC Genome Browser You can right-click most items to zoom in on them, or highlight them in the image For gene tracks, you can also zoom to specific exons or codons
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UCSC Genome Browser 101 UCSC Genome Browser 101 This tutorial is a basic introduction of the most common UCSC Genome Browser usage This includes the navigation menu, configuration of the tracks display, and where to find additional resources Sections Explore each of the three section below to learn the material in a different form
UCSC Genome Browser Home UCSC Genome Browser We support various kinds of searching from the tracks display address bar You can use HGVS terms (NM_198056 2:c 1A>C), gnomAD style variants (1-55051215-G-GA), BLAT sequences directly from the search box, documentation, and more
UCSC Genome Browser Home - BLAT UCSC Genome Browser Have you ever wondered what we mean by "track" or what the difference is between "haplotype" and "fix" sequences? Take a look at the Genome Browser Glossary page for an explanation of these terms and many more
Genome Browser Users Guide - BLAT What does the Genome Browser do? As vertebrate genome sequences near completion and research re-focuses on their analysis, the issue of effective sequence display becomes critical: it is not helpful to have 3 billion letters of genomic DNA shown as plain text! As an alternative, the UCSC Genome Browser provides a rapid and reliable display of any requested portion of genomes at any scale
Genome Browser Documentation Genome Browser Documentation Browse all UCSC Genome Browser documentation by topic Tutorials Tutorials Hubs Hubs Basics
Other Tools - UCSC Genome Browser Other Tools from the UCSC Genome Browser The UCSC Genome Browser team develops and updates the following main tools: the Genome Browser, BLAT, In-Silico PCR, Table Browser, and LiftOver We maintain the following less-used tools: Gene Sorter, Genome Graphs, and Data Integrator These are available from the "Tools" dropdown menu at the top of