fbreitwieser pavian: Interactive analysis of metagenomics . . . - GitHub Pavian is a interactive browser application for analyzing and visualization metagenomics classification results from classifiers such as Kraken, KrakenUniq, Kraken 2, Centrifuge and MetaPhlAn Pavian also provides an alignment viewer for validation of matches to a particular genome
Pavian - Johns Hopkins University Pavian is a web application for exploring metagenomics classification results, with a special focus on infectious disease diagnosis Pinpointing pathogens in metagenomics classification results is often complicated by host and laboratory contaminants as well as many non-pathogenic microbiota
Pavian - Hiplot Pavian is a tool for interactive analysis of metagenomics classification results Read more about it in the Preprint or its vignette It's built on R and Shiny , and supports Kraken , Centrifuge and MetaPhlAn report files
Pavian: interactive analysis of metagenomics data for microbiome . . . Pavian is a web application for exploring classification results from metagenomics experiments With Pavian, researchers can analyze, visualize and transform results from various classifiers—such as Kraken, Centrifuge and MethaPhlAn—using interactive data tables, heatmaps and Sankey flow diagrams
Pavian: Interactive analysis of metagenomics data for . . . - bioRxiv With Pavian, researchers can analyze, display and transform results from the Kraken and Centrifuge classifiers using interactive tables, heatmaps and flow diagrams Pavian also provides an alignment viewer for validation of matches to a particular genome
PaViAn download | SourceForge. net Download PaViAn for free A Tool for Retrieval, Visualization and Analysis of biological Pathways Import a Gene or Protein Set from any Excel file
Pavian: Interactive analysis of metagenomics data for microbiome . . . Pavian is a web application for exploring classification results from metagenomics experiments With Pavian, researchers can analyze, visualize and transform results from various classifiers-such as Kraken, Centrifuge and MethaPhlAn-using interactive data tables, heatmaps and Sankey flow diagrams