The IMOD Home Page IMOD is a set of image processing, modeling and display programs used for tomographic reconstruction and for 3D reconstruction of EM serial sections and optical sections
IMOD Download - University of Colorado Boulder Windows 64-bit with CUDA 8: Download full clickable installer or full command-line self-installing file of IMOD 5 1 2 for 64-bit Windows versions, built with CUDA 8 0, and should be used if you have drivers supporting CUDA 8 or 9
IMOD Users Guide - University of Colorado Boulder 1 Installation All of the IMOD programs are available via the IMOD Download Page The distribution is bundled together using the tar program with gzip compression, then placed in a file after a shell script that can extract and install the programs
IMOD Tomography Guide - University of Colorado Boulder IMOD 4 11 provides new flexibility with regard to the parameters of a tilt series Originally, the algorithm and parameters in Beadtrack were tuned to operate well over a certain range of bead sizes and with tilt intervals of about 2 or less
Etomo Tutorial for IMOD Version 5. 1 - University of Colorado Boulder If you do not have IMOD 5 1 installed, you should either upgrade to it, or enter imodhelp in the terminal and select the Etomo Tutorial that comes in your installed version To get started, download the 1K sample data set from our web site Unpack the data by typing:
Program Descriptions for IMOD - University of Colorado Boulder This section lists Fortran image processing programs for MRC image files, Fortran programs that work with IMOD models, and scripts that run these programs Some of the programs prompt users for input or use command files, but most have been converted to take command line and keyword-value input
3dmod Introduction - University of Colorado Boulder Because IMOD does not produce files that can be used in movie players, if you want to make a movie of your images or models, you need to make a series of snapshots of a window and import those images into movie-making software
Using Etomo - University of Colorado Boulder Etomo provides a graphical user interface (GUI) to the IMOD Tomography package The general user interface design idea on which Etomo is built is to present a separate panel for each distinct step in computing a tomogram with the IMOD package
Cryo Example Data Set - University of Colorado Boulder On Linux, Mac OS X, or Windows with Cygwin, if you are using the bash shell or a related shell, enter: export IMOD_CALIB_DIR= Or, if you are use tcsh as the shell, enter: setenv IMOD_CALIB_DIR On Windows without Cygwin, enter: set IMOD_CALIB_DIR=