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- Gene number expansion and contraction in vertebrate genomes . . .
In particular, a larger proportion of Ionly (Table 1), ∼22% are found in ⱖ2 vertebrate genomes (2881 gene genes in the worm and the sea urchin genomes (36% and 30%, types with a total of 24,068 gene copies) and the rest (∼78%, respectively) form multigene families than do the other inverte10,157 gene types with 11,375 gene copies) are
- New algorithms for accurate and efficient de novo genome . . .
Building de novo genome assemblies for complex genomes is possible thanks to long-read DNA sequencing technologies However, maximizing the quality of assemblies based on long reads is a challenging task that requires the development of specialized data analysis techniques We present new algorithms for assembling long DNA sequencing reads from haploid and diploid organisms The assembly
- National Center for Biotechnology Information
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- Chromosome-level de novo genome assemblies of over 100 plant . . .
Haplotype-phased genome assembly The size of a genome assembly generally corresponds to the haploid genome size of the target plant species In all plant species, including allogamous species with a heterozygous genome, an integrated genome sequence, also known as a reference genome sequence, is usually generated from two haploid sequences
- About the Ensembl Project
By 2020, Ensembl supported over 50,0000 genomes across the Ensembl and Ensembl Genomes websites including Rapid Release, which gives fast access to freshly annotated genomes, and COVID-19, providing access to the SARS-CoV-2 genome The Ensembl project is co-lead by Rob Finn and Andy Yates and receives input from an independent scientific
- Ensembl Genomes 2022: an expanding genome resource for non . . .
Ensembl Genomes (https: www ensemblgenomes org) provides access to non-vertebrate genomes and analysis complementing vertebrate resources developed by the Ensembl project (https: www ensembl org) The two resources collectively present genome annotation through a consistent set of interfaces spann …
- Sequence and comparative analysis of the chicken genome . . .
Because the chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to have its genome sequenced, the draft sequence of its genome--composed of approximately one billion base pairs of sequence and an estimated 20,000-23,000 genes--provides a new perspective on vertebrate genome evolution, while also improving the
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