安裝中文字典英文字典辭典工具!
安裝中文字典英文字典辭典工具!
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- Introduction - MEME Suite
The MEME Suite allows you to discover novel motifs in collections of unaligned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses It provides motif discovery algorithms using both probabilistic (MEME) and discrete models (STREME), which have complementary strengths
- Overview - MEME Suite
The MEME Suite provides three tools for motif enrichment analysis--measuring the enrichment of known motifs in sets of sequences The motif enrichment may be anywhere in the sequences (SEA, AME), or concentrated in the central regions of the sequences (CentriMo)
- Motif Databases - MEME Suite
The utilities meme-get-motif, meme-rename and motif-shuffle columns also support UTF-8 in the motif identifiers in their Minimal MEME Motif Format input prosite2meme: (NEW) convert PROSITE patterns to MEME motif format
- Download Releases - MEME Suite
MEME Suite Software These releases include the complete source code of the MEME Suite which can be compiled to run on OS X or Linux They can be compiled on a Windows PC using a virtual machine (running Linux) or the Windows Subsystem for Linux
- STREME - MEME Suite
STREME converts each of the nref (default=4) most significant seed words into a motif, and iteratively refines each motif, selecting the motif that best discriminates the primary sequences from the control sequences At each iteration of refinement, the current motif and the (k-1)-order background are used with the suffix tree to efficiently
- FIMO - MEME Suite
Outputs from MEME, STREME and DREME are supported, as well as Minimal MEME Format You can convert many other motif formats to MEME format using conversion scripts available with the MEME Suite
- MEME-ChIP - MEME Suite
Outputs from MEME, STREME and DREME are supported, as well as Minimal MEME Format You can convert many other motif formats to MEME Motif format using conversion scripts available with the MEME Suite
- MEME Motif Formats - MEME Suite
There are two flavors of MEME Motif Format: MEME, STREME and DREME Output Formats; Minimal MEME Motif Format; Programs for converting many other motif formats into Minimal MEME Motif Format are provided by the downloadable version of MEME Suite
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