megahit软件|对于巨大样本数据的kmer选择 - 简书 MEGAHIT(MetaGenome Assembler using succinct de Bruijn graph)是一个专为宏基因组数据设计的de novo组装工具,旨在高效处理大型、复杂和高多样性的宏基因组序列数据。 它由香港中文大学(The Chinese University of Hong Kong)的团队开发,主要开发者包括Dinghua Li、Chi-Man Liu和Tak-Wah Lam等人。
Metagenomics - MEGAHIT "An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph" Microbial community assembly (metagenomics) http: www ncbi nlm nih gov pubmed 25609793 https: github com voutcn megahit Input: metagenomics sample as paired-end fastq files _R1 and _R2
MEGAHIT v1. 0: A fast and scalable metagenome assembler driven by . . . In late 2014 we released MEGAHIT v0 1 (together with a brief note of Li et al (2015) [1]), which is the first NGS metagenome assembler that can assemble genome sequences from metagenomic datasets of hundreds of Giga base-pairs (bp) in a time- and memory-efficient manner on a single server
megahit - bioconda | Anaconda. org Install megahit with Anaconda org MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph