Visualize Climate data with Panoply netCDF viewer - Galaxy Training Network We will learn to use panoply to visualize the sea ice area fraction over the poles (southern and northern poles) and surface temperatures for two different years (1979 and 2018) NetCDF format NetCDF data format is a binary format and to be able to read or visualize it, we would need to use dedicated software or libraries that can handle this
Visualize EBV cube data with Panoply netCDF viewer To make sure all your plots stored in outputs folder get exported to Galaxy, you need to quit panoply: File –> Quit Panoply Go back to your current Galaxy history and you should find Panoply outputs; Open image in new tab Figure 6: Panoply outputs in Galaxy Conclusion We have now learnt how to visualize EBV cube data using Panoply
Sentinel 5P data visualisation - Galaxy Training Network Select Quit Panoply; Go back to your current Galaxy history and you should find Panoply outputs On the top of the galaxy page click on the galaxy-scratchbook to activate the multi view Then in the panoply outputs click on the galaxy-eye of each of the png images You should be able to rearrange the windows to see each outputs
Panoply: interative plotting tool for geo-referenced data Ecology Visualize EBV cube data with Panoply netCDF viewer GTN The GTN provides learners with a free, open repository of online training materials, with a focus on hands-on training that aims to be directly applicable for learners
Functionally Assembled Terrestrial Ecosystem Simulator (FATES) Open the Panoply; Check ALP1_exp nc dataset selected in the netcdf input field; Click Run Tool; The tool will start running and will stay running permanently; Click on the “User” menu at the top and go to “Active Interactive Tools” and locate the Panoply instance you started Click on your Panoply instance Open image in new tab
FAQs Visualize Climate data with Panoply netCDF viewer Climate Learn to analyze climate data through Galaxy GTN The GTN provides learners with a free, open repository of online training materials, with a focus on hands-on training that aims to be directly applicable for learners
Discovering Galaxy through climate analysis - Galaxy Training Network During this session you will first learn about the galaxy interface and how to use batch tools Then, you’ll be able to run through a jupyter notebook launch from Galaxy Finally, you will conduct a climate analysis on a desktop application with Panoply Time estimation: 3 hours Learning Objectives Understand what Pangeo and Xarray are
Recordings - Visualize Climate data with Panoply netCDF viewer This is a collection of recordings from various training events where the Visualize Climate data with Panoply netCDF viewer tutorial was taught by members of the GTN community The tutorial may have changed after the recording was made; below each video you will find a link to the tutorial as it appeared at the time of recording
Ecology Tutorial List - Galaxy Training Network Learn to analyse Ecological data through Galaxy GTN The GTN provides learners with a free, open repository of online training materials, with a focus on hands-on training that aims to be directly applicable for learners
Galaxy Training Network { "a_galaxy_workflow": "true", "annotation": "From Copernicus Sentinel 5P data to panoply visualization of volcanic activity impact to atmosphere", "creator