Human BLAT Search BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more It may miss more divergent or shorter sequence alignments It will find perfect sequence matches of 20 bases
BLAT (bioinformatics) - Wikipedia BLAT (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC) in the early 2000s to assist in the assembly and annotation of the human genome [1]
BLAT —The BLAST -Like Alignment Tool - PubMed Central (PMC) Analyzing vertebrate genomes requires rapid mRNA DNA and cross-species protein alignments A new tool, BLAT, is more accurate and 500 times faster than popular existing tools for mRNA DNA alignments and 50 times faster for protein alignments at
Kent Informatics - Tools to analyze the human genome - BLAT, In-Silico . . . BLAT is commonly used to look up the location of a sequence in the genome or determine the exon structure of an mRNA molecule, but expert users can run large batch jobs and make internal parameter sensitivity changes by installing command-line BLAT on their own Linux server
Blat on Biowulf - National Institutes of Health BLAT is a DNA Protein Sequence Analysis program written by Jim Kent at UCSC It is designed to quickly find sequences of 95% and greater similarity of length 40 bases or more It may miss more divergent or shorter sequence alignments It will find perfect sequence matches of 33 bases, and sometimes find them down to 22 bases
BLAT Search Genome | HSLS - University of Pittsburgh As a sequence alignment tool, BLAT is more accurate and 500 times faster than popular existing tools for mRNA DNA alignments and 50 times faster for protein alignments at sensitivity settings typically used when comparing vertebrate sequences
BLAT BLAT - Rapidly align sequences to the genome In-Silico PCR - Rapidly align PCR primer pairs to the genome Table Browser - Download and filter data from the Genome Browser
BLAT - UFRC - University of Florida BLAT (the BLAST-Like Alignment Tool) is a software program developed by Jim Kent at UCSC to identify similarities between DNA sequences and protein sequences It was developed to assist in the annotation of the human genome sequence
Human BLAT Search - UCSC BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more It may miss more divergent or shorter sequence alignments It will find perfect sequence matches of 20 bases
BLAT —The BLAST -Like Alignment Tool - Genome Research A new tool, BLAT, is more accurate and 500 times faster than popular existing tools for mRNA DNA alignments and 50 times faster for protein alignments at sensitivity settings typically used when comparing vertebrate sequences